Mammalian evolution of human cis-regulatory elements and transcription factor binding sites
Andrews, G., Fan, K., Pratt, H. E., Phalke, N., Zoonomia Consortium, Karlsson, E. K., Lindblad-Toh, K., Gazal, S., Moore, J. E., Weng, Z. Mammalian evolution of human cis-regulatory elements and transcription factor binding sites. Science (2023).
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models
Rozowsky, J., Drenkow, J., Yang, Y. T., Gursoy, G., Galeev, T., Borsari, B., Epstein, C. B., Xiong, K., Xu, J., Gao, J., Yu, K., Berthel, A., Chen, Z., Navarro, F., Liu, J., Sun, M. S., Wright, J., Chang, J., Cameron, C. J. F., Shoresh, N., Gaskell, E., Adrian, J., Aganezov, S., Aguet, F., Balderrama-Gutierrez, G., Banskota, S., Corona, G. B., Chee, S., Chhetri, S. B., Martins, G. C. C., Danyko, C., Davis, C. A., Farid, D., Farrell, N. P., Gabdank, I., Gofin, Y., Gorkin, D. U., Gu, M., Hecht, V., Hitz, B. C., Issner, R., Kirsche, M., Kong, X., Lam, B. R., Li, S., Li, B., Li, T., Li, X., Lin, K. Z., Luo, R., Mackiewicz, M., Moore, J. E., Mudge, J., Nelson, N., Nusbaum, C., Popov, I., Pratt, H. E., Qiu, Y., Ramakrishnan, S., Raymond, J., Salichos, L., Scavelli, A., Schreiber, J. M., Sedlazeck, F. J., See, L. H., Sherman, R. M., Shi, X., Shi, M., Sloan, C. A., Seth Strattan, J., Tan, Z., Tanaka, F. Y., Vlasova, A., Wang, J., Werner, J., Williams, B., Xu, M., Yan, C., Yu, L., Zaleski, C., Zhang, J., Ardlie, K., Michael Cherry, J., Mendenhall, E. M., Noble, W. S., Weng, Z., Levine, M. E., Dobin, A., Wold, B., Mortazavi, A., Ren, B., Gillis, J., Myers, R. M., Snyder, M. P., Choudhary, J., Milosavljevic, A., Schatz, M. C., Guigó, R., Bernstein, B. E., Gingeras, T. R. & Gerstein, M. Cell (2023)
Downregulation of Hsp90 and the antimicrobial peptide Mtk suppresses poly (GR)-induced neurotoxicity in C9ORF72-ALS/FTD
Lee, S., Jun, Y.-W., Linares, G. R., Butler, B., Yuva-Adyemir, Y., Moore, J., Krishnan, G., Ruiz-Juarez, B., Santana, M., Pons, M., Silverman, N., Weng, Z., Ichida, J. K. & Gao, F.-B. Neuron (2023).
Building integrative functional maps of gene regulation
Xu, J., Pratt, H. E., Moore, J. E., Gerstein, M. B. & Weng, Z. Hum Mol Genet (2022).
FAVOR: functional annotation of variants online resource and annotator for variation across the human genome
Zhou, H., Arapoglou, T., Li, X., Li, Z., Zheng, X., Moore, J., Asok, A., Kumar, S., Blue, E. E., Buyske, S., Cox, N., Felsenfeld, A., Gerstein, M., Kenny, E., Li, B., Matise, T., Philippakis, A., Rehm, H., Sofia, H. J., Snyder, G., NHGRI Genome Sequencing Program Variant Functional Annotation Working Group, Weng, Z., Neale, B., Sunyaev, S. R. & Lin, X. Nucleic Acids Res (2022)
